Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYAIIETGGKQIKVEAGQEIYVEKLAGEVGDVVTFDKVLFVGGDSAKVGVPFVEGA---TVTAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAINA
2ZJP Chain:O ((5-98))
----IQTGGKQYRVSEGDVIRVESLQGEAGDKVEL-KALFVGGEQT----VFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGI--
General information:
TITO was launched using:
RESULT:
Template:
2ZJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5160 for 506 contacts (10.2/contact) +
2D Compatibility (PS) -8968 + (NN) 7853 + (LL) 912
1D Compatibility (HY) -6400 + (ID) 2250
Total energy: -3693.0 ( -7.30 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJP-query.scw
PDB file :
Tito_Scwrl_2ZJP.pdb
: