Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLQNYSKSEKAFKEAKKVLPGGVNSPV---RAFNSVDASPVFMDHGKGAYITDVDGNEYIDYVLSWGPLILGHTDPAVVNAITKAALKGTSFGTPTEIETELAKLVIERVPSIEIVRMVSSGTEATMSAIRLARGYTKREKILKFEGSYHGHGDSLLIKAGSGVATLGLPDSPGVTKGLAADTITVPYNDIEGAKLAFEKYGEEIAAVIVEPVAGNMGVVPPIEGFLEGLRELTTKFGSLLIFDEVMTGFRVDYYSAQGYYVVTPDLTCLGKVIGGGLPVGAYGGKKEIMEQIAPA--GSIYQAGTLSGNPLAMNAGFETVRQL-TPQHYDVFRTLIKRMEEGLTEISARRQVPLSINKAGSMFGFFFTDQKVINFDTAKTSNLEFFRNYYREMLGQGIFLPPSQFEGVFISTMHTENEIDKTLEAFDTTCKILRG
2YKU Chain:A ((62-431))-----------ERARRSMPGGNTRSILFHRPF------PLVIAQGTGSRFQDVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGG----LLNFASGHAPTNAPYH--VVLGV--------YNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMTS-RLSGGGAQEMLGISADLTTLGKYIGGGMSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAP---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YKU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133996 for 3008 contacts (-44.5/contact) +
2D Compatibility (PS) -39559 + (NN) -18220 + (LL) 3572
1D Compatibility (HY) -23600 + (ID) 6550
Total energy: -218353.0 ( -72.59 by residue)
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_2YKU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YKU-query.scw
PDB file : Tito_Scwrl_2YKU.pdb: