Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADDIYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDA---SSRFDFSTSNHYHAICNVCGKIVDFHYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN
4MTE Chain:A ((6-151))
---TQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEA--
General information:
TITO was launched using:
RESULT:
Template:
4MTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74347 for 923 contacts (-80.5/contact) +
2D Compatibility (PS) -15600 + (NN) -5075 + (LL) 384
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -103188.0 ( -111.80 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_4MTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MTE-query.scw
PDB file :
Tito_Scwrl_4MTE.pdb
: