Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILLIGASGTLGSAVKDRLEKK-AEVITAGRHSGD-------------VTVDITSIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQI---NLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLESFFQGFVPVPAAKVARAFEKSVFGAQTGESYKVY
1WNT Chain:A ((9-185))
-RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTS---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WNT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61880 for 1219 contacts (-50.8/contact) +
2D Compatibility (PS) -16659 + (NN) -2081 + (LL) 3068
1D Compatibility (HY) -9600 + (ID) 2000
Total energy: -89152.0 ( -73.14 by residue)
QMean score : 0.305
(partial model without unconserved sides chains):
PDB file :
Tito_1WNT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WNT-query.scw
PDB file :
Tito_Scwrl_1WNT.pdb
: