Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKRILMLEDGNYFIGDAIGSEKETIGEVVFNTGMTGYQETITDPSYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEFASNWRNQITLNEFLKEKGIPGIAGIDTRKLTKLIRKEGTLKGILAAETADKEELLHHLRSVRLPVDQVHEVSSAKAFASPGDGKRVVLVDYGVKSS-----ILRELNKRNCYVTVVPYNTSAEEILAMHPDGVMLSNGPGDPKDVPEALEMIRGIQGKL------PLFGICLGHQLFALANGADTFKLKFGHRGANHPVKELATGRVDFT-AQNHGYAVEKDSLIGTDLKVTHIELNDE----------TVEGLAHKEYPAYTVQYHPEANPGPSDVNYLFDEFMEMMNGKEEGELHA |
| 2A9V Chain:A ((15-182)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KIYVVDNGGQWTHREWRVLRELGVD---TKIVPNDIDSSELDGL--DGLVLSGGA---PNIDEELDKL-GSVGKYIDDHNYPILGICVGAQFIALHFGASVVK-------AKHP--EFGKTKVSVMHSENIFGGLPSEITVWENHNDEIINLPDDFTLAASSATCQVQGFYHKTRPIYATQFHPEV---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56898 for 1072 contacts (-53.1/contact) +
2D Compatibility (PS) -15560 + (NN) -3099 + (LL) 11728
1D Compatibility (HY) -10000 + (ID) 2500
Total energy: -76329.0 ( -71.20 by residue)
QMean score : 0.476
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