Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNLLSMEALTVHEIEHLLEQAAQFKRGKKATFNEQTFAVNMFFEPSTRTHTSFEVAEKKLGVEVVSF-DAASSSM-TKGETLYDTLLTMQAVGVNVAVIRHSEENYYAGLEKL------DIAIVNGGDGCGEHPSQSLLDLFTIKEQFGTFQGLKVAIAGDIRHSRVANSNMKVLKRL-GAELFFSGPR---------EWFDESYLAYGTYLPVDEIVEKVDVMMLLRVQHERHSGTDEFTKESYHEKFGLTEDRAKKLKEDAIIMHPSPVNRDVEIADSLVESEKSRIVTQMTNGVFIRMAILEAILKEQEMRAKLCTY
1RAF Chain:A ((7-305))-KHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTI-SVISTYVDAIVMRHPQE----GAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKER---LDPSEYANVKAQFVLRASDLHNAKANMKVLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLN-----------


General information:
TITO was launched using:
RESULT:

Template: 1RAF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127560 for 2279 contacts (-56.0/contact) +
2D Compatibility (PS) -30567 + (NN) -13854 + (LL) 1808
1D Compatibility (HY) -18800 + (ID) 4800
Total energy: -193773.0 ( -85.03 by residue)
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_1RAF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RAF-query.scw
PDB file : Tito_Scwrl_1RAF.pdb: