Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATVEFEKGQVMEDALIDAVEEAGYEVA
4A4J Chain:A ((2-65))
-QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYH-GETTPQILTDAVERAGYH--
General information:
TITO was launched using:
RESULT:
Template:
4A4J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42717 for 447 contacts (-95.6/contact) +
2D Compatibility (PS) -7012 + (NN) -997 + (LL) 608
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -56468.0 ( -126.33 by residue)
QMean score : 0.790
(partial model without unconserved sides chains):
PDB file :
Tito_4A4J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A4J-query.scw
PDB file :
Tito_Scwrl_4A4J.pdb
: