Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELLNRTEKLLLQNEKNWELYLSNREEAKPFDFYKDMKPFVDEAKNSADAFLELAIPWVNKERPPYLGELQLRQACDNVQMTAVSAFNGKSFYKHFLDHYQSTKYTLTRVRDFLKRKEELM
2V2T Chain:A ((190-239))
----------------------------------------------------ELRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSTASWEGRADFSQA-------------------
General information:
TITO was launched using:
RESULT:
Template:
2V2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6743 for 214 contacts (-31.5/contact) +
2D Compatibility (PS) -4935 + (NN) -489 + (LL) 5836
1D Compatibility (HY) -800 + (ID) 800
Total energy: -7931.0 ( -37.06 by residue)
QMean score : -0.014
(partial model without unconserved sides chains):
PDB file :
Tito_2V2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V2T-query.scw
PDB file :
Tito_Scwrl_2V2T.pdb
: