Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEK---KPKKILHVNLGMEKE---------TPIWEVAYLDKN--DKL-NYFDINFETGEWYREIENL |
| 2O3O Chain:A ((170-252)) | ------------------------------------------------------------------------------------------------------------------------------QKESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWRITVEYEKEKKTVQEYFTVNALESTILDT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6136 for 346 contacts (-17.7/contact) +
2D Compatibility (PS) -6612 + (NN) 2079 + (LL) 10152
1D Compatibility (HY) -4800 + (ID) 500
Total energy: -5817.0 ( -16.81 by residue)
QMean score : 0.376
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