Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLITNKQGLVGAITVPGDKSMSHRSIMFGAIAEGKTVIRHFLRADDCLGTIKAFKALGVKI----EETDEEIIVHGTGFDGLKQADGPLDI--GNSGTTIRLMMGILAGRDFDTVILGDESIAKRPMNRVMLPLQQMGAKMHGKDGSEFAPITITGKQSLKRMEYHMPVASAQVKSAIIFAALQAEGETIIHEK-----EKTRDHTEHMIRQFGGEIEMDGLT-IRVKGGQKFTGQ-EMTVPGDVSSAAFFIVAGLITPGSEIELTHVGLNPTRTGI--FDVVKQMGGSLVVKDSSRSTGKLAGTVVVKTSKLKGTEIDGDIIPRLIDEIPVIALLATQAEGTTIIKDAAELKVKETNRIDAVATELNKMGADITPTEDGLIIHGKTPLHAANVTSYGDHRIGMMLQIAALLVEEGDVELERPEAVSVSYPTFFEDIRSLLK |
| 2QFQ Chain:A ((14-420)) | -----------GTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNG----GPLHAEGALELFLGNAGTAMRLLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSS-QFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGT-VKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTR---------GELNAIDMDMNHIP---DAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVAL--SDTPVTILDPKCTAKTFPDYFEQL----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -187845 for 3657 contacts (-51.4/contact) +
2D Compatibility (PS) -40541 + (NN) -3586 + (LL) 3416
1D Compatibility (HY) -28400 + (ID) 6550
Total energy: -263506.0 ( -72.06 by residue)
QMean score : 0.490
|
|
|