Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWKKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSPKVAALQANSNVET-EIYPDGWASSLRKEVTNFYQLEEEELIFTAGVDELIELLTRVLLDTTKNTVMATPTFVQYRQNALIEGAEVREIPLLTDGAHDLEGMLNAIDEKTTIVWICNPNNPTGNYIDLADIQAFLDKVP-SDILVVLDEAYIEYVTPQPKKHEKLIRTYKNLIITRTFSKIYGLASARVGYGIA-DKEIINQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRISNANGIKQYEAFAKRFEQV----KLYPANGNFVLIDL-GIEARTIF-SYLEKNGYITRSGAALGFPTA-VRITIGKEEENSAVIALLEKLL |
| 3FTB Chain:A ((32-355)) | ----------------------------------SSNINPLGI-PKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDDVDSVI-IGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKDTNYIEESLLWIK---KERKRFIEELNKIGFIKRVFSPHANFVLCRLENISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIKDEKKNTKFLRALK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136217 for 2574 contacts (-52.9/contact) +
2D Compatibility (PS) -34645 + (NN) -20878 + (LL) 3256
1D Compatibility (HY) -25200 + (ID) 4350
Total energy: -218034.0 ( -84.71 by residue)
QMean score : 0.473
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