Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEITVRAKSKTYPVYINEFALEDIREKWTKSLAKFSHVFVLTDGHVAELHKAKLDAVLADLPVVTYYVAPNGEEAKTFRVYEDVMTKMIETGLDRKAVLIAFGGGVIGDLGGFVAATYMRGIPFYQVPTTVLA-HDSAVGGKVAINHPLGKNMIGNFYQPEAVIYDTQFFATLPERELRSGFAEMIKHALISDLTLLRALMDTFTEPKDFYTKDLTPFLQRGIEIKANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYALTMSETIYGL-DFDLAEFKTWLEQLGYDTTFDASVPFSKILENMRHDKKTTF-NEISMVLLEEIGKPVIFKADDDLIFETYKRVMRKGGNVI |
| 2D2X Chain:A ((71-348)) | ------------------------------------------------------------------------GEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVAGVAAGMMFRGIALIHVPTTFLAASDSVLSIKQAVNLTSGKNLVGFYYPPRFVFADTRILSESPPRQVKAGMCELVKNMLIL----KEFTEDDLNSANVYSPKQLETFINFCISAKMSVLSEDIYEKKKGLIFEYGHTIGHAIE-LAEQGGITHGEAIAVGMIYAAKIANRMNLMPEHDVSAHYWLLNKIGALQDIPLKSDPDSIFHYLIH------EDNLGMILLSGVGKPAMYN--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141472 for 2030 contacts (-69.7/contact) +
2D Compatibility (PS) -27519 + (NN) -2553 + (LL) 8268
1D Compatibility (HY) -18400 + (ID) 4100
Total energy: -185776.0 ( -91.52 by residue)
QMean score : 0.460
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