Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSILMNQAIQAFLLEDIGQYDLSAGTVFPRDTMGEGVFLAKETGILCGISIPPKVYELLGGNIQFEAYKKDGDWVQ--KGD----IIAAVKAPVRTLLSGERVILNLMQRMSGIASQTNFAIKQLDDSAIR--ICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSKGGIKA |
| 3C2V Chain:A ((15-290)) | -------QDVTNWLSEDVPSFDF-GGYVVGSD-LKEANLYCKQDGMLCGVPFAQEVFNQC--ELQVEWLFKEGSFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDN---------------HFLLECSGGLNLDNL--YLCDDIDIYSTSSIHQGTPVIDFSL-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C2V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -128084 for 1889 contacts (-67.8/contact) +
2D Compatibility (PS) -26526 + (NN) -6571 + (LL) 1584
1D Compatibility (HY) -20000 + (ID) 4600
Total energy: -184197.0 ( -97.51 by residue)
QMean score : 0.376
|
|
|