Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPF--------SEEVKTVAELHQFMETEGLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS |
3GK6 Chain:A ((20-99)) | ------------------------------------------------------------------------------------------------------------------------------------QGMNISEINGFEVTGFVVRTTNADEMNPMTAKIGNLWEKFYLNA-APKLTDK----SKVYGLYTNYES-DFTGAFDVIACSDT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8474 for 365 contacts (-23.2/contact) +
2D Compatibility (PS) -7348 + (NN) -1001 + (LL) 9744
1D Compatibility (HY) -800 + (ID) 250
Total energy: -8129.0 ( -22.27 by residue)
QMean score : 0.302
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