Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYQLVIVGYG-GMGSYHVTLASAADNLEVHGVFDILEEKREAAA--EKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKKVNKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANGIPGDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALGDEVDDGFVTFITFENGITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTSEPTPIKAGQGLTKTMAPPSEEATN----TLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
| 3FD8 Chain:A ((9-338)) | -------FIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEINEVETHIDYYR--PGSITEQGPKENGSFYGLGIHLMDRMIALFGRPDQVTYDIRNNEVSEAVDNYFDVDLHYGSKLKVKVKTNHSVASPYPRFIVHGSNGSFIKY-----GEDQQENDLKAGIMPDAPGFGEDSPMYYGEVTYRNGNGDWIKKQIKTPVGDYGRYYDAVYETLKNGAPQLVTKEQALTNIEILEAGF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146618 for 2600 contacts (-56.4/contact) +
2D Compatibility (PS) -34686 + (NN) -15537 + (LL) 2144
1D Compatibility (HY) -17200 + (ID) 3950
Total energy: -215847.0 ( -83.02 by residue)
QMean score : 0.447
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