Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVTVWNEFLHEKEDDAVLAIYPDGIHGQIASFLEKAGIEAGTATLEEPEHGLTEEVLANTDVLIWWGHMGHDRVEDKIVDRVQKRVLEGMGLVVLHSGHMSKIFMRLMGTSCDLKWREANERERLWVVDPTHPIAKGIGEFIELDEEEMYGEHFDIPTPDELIFLGWFEGGEVFRSGITYKRGNGRIFYFQPGHESYPTYHHPDIQQVIINGVHWCAEGRKNYPAYGNHQPLEKIGRK
1T0B Chain:D ((9-245))
--RVVVWNEFRHEKKDEQVRAIYPEGMHTVIASYLAEAGFDAATAVLDEPEHGLTDEVLDRCDVLVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVLHSGHFSKIFKKLMGTTCNLKWREADEKERLWVVAPGHPIVEGIGPYIELEQEEMYGEFFDIPEPDETIFISWFEGGEVFRSGCTFTRGKGKIFYFRPGHETYPTYHHPDVLKVIANAVRWAAPVNRGEIVFGNVKPLEPIKA-
General information:
TITO was launched using:
RESULT:
Template:
1T0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145597 for 2001 contacts (-72.8/contact) +
2D Compatibility (PS) -25498 + (NN) -13074 + (LL) 324
1D Compatibility (HY) -28000 + (ID) 7800
Total energy: -219645.0 ( -109.77 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1T0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T0B-query.scw
PDB file :
Tito_Scwrl_1T0B.pdb
: