Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKVDSLSKKIDGKLLLDKITFEVKPGEIIGIVGRNGVGKTTLFRTIMGFYIPDAGDVYLDE---PLSKNHQLKQKL-FMLQDNL----NCWDGYKIP----TIKKFYQKTYPLFDGDKFDNLMKQVNLAKDVKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQKKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNHI-EESYHLESLREQAVKIQIAFENKKIPHFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTLEDLFIYHLEEQGGEKL |
| 2FFB Chain:A ((18-233)) | --------KPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDQATSALDYESEHVIMRNMHKICKGRT--VIIIAHRLSTVKN-ADRIIVMEKGKIVEQGKHKELLSE------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90103 for 1494 contacts (-60.3/contact) +
2D Compatibility (PS) -20887 + (NN) -2879 + (LL) 7696
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -123673.0 ( -82.78 by residue)
QMean score : 0.454
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