Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYKQFYTYDENGDYLETILVFEDEKGLINQPKNSTNIEPSIIENGIARAMYYPSWDGSIWKEDKKRWESENPIIPAEKTEIEKLREELLLTQEALAALFESNLG |
4K57 Chain:A ((39-65)) | ---------------------------------------------------HYPLYIGGEWVDTKERMVSLNPSAPSE--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2254 for 88 contacts (25.6/contact) +
2D Compatibility (PS) -2703 + (NN) -382 + (LL) 5828
1D Compatibility (HY) 0 + (ID) 550
Total energy: 4447.0 ( 50.53 by residue)
QMean score : 0.412
|
|
|