Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFN---------------------DVAYNNFPLQLTVLDSNNSINS-TKDLAGKRV-ITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATI-STPFAVDFQNKTSAIKEKVVGDVLSNA----KVYFMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY |
| 4POX Chain:A ((5-257)) | ----------------------------------KSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKRM-NIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPMTFLTTADSPLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMPSVQISTYDTI------DNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMFGPRMTGGLFGKGVGVGIRKEDADLKALFDKAIDAAIADGTVQKLSQQWFGYDASP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4POX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63551 for 1669 contacts (-38.1/contact) +
2D Compatibility (PS) -23785 + (NN) -3700 + (LL) 2852
1D Compatibility (HY) -13600 + (ID) 3200
Total energy: -104984.0 ( -62.90 by residue)
QMean score : 0.423
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