Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSILIADDDKEIVDLVKLYLQNEGYTIYQAYDGAEVWRLVQEKQPTLVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMVKPFNPLELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVGGKELHLTTSEFDILFLLASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENVIKTIWGVGYKIEI
2A9Q Chain:A ((4-118))
----ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDL-----DGLEVAKTIRKTSSV-PILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRR---------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85377 for 826 contacts (-103.4/contact) +
2D Compatibility (PS) -11997 + (NN) -9307 + (LL) 9748
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -110033.0 ( -133.21 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_2A9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9Q-query.scw
PDB file :
Tito_Scwrl_2A9Q.pdb
: