Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFT-EKVVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT |
1DAR Chain:A ((587-678)) | --------------------------------------------------------------------------------------------------------------------SMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42746 for 607 contacts (-70.4/contact) +
2D Compatibility (PS) -10055 + (NN) -3144 + (LL) 8040
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -50905.0 ( -83.86 by residue)
QMean score : 0.507
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