Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------LLIWSIL-ISFAVGIIMVPIIRKFAFRINAVDTPRERHKHTKTTATLGGLAIFISFSVGMILAPI-------DKSGFLPIYFGALIIIATGFIDDIFDLSPKWKMLGQILAALCVTVWGDITINFINVPFYGQVDFGYFAIPL--SIIWIVAIVNALN-----------------LIDGLDGLAGGISIIALMTIAGMALLL-----------------KDVFVAPVALILVAAVAAFLIY-NFPPASIFMGDTGAL------FLGYMIAVLSLMGFKNVTFISLLVPLIILGVPL--SDTFFAIVRRLKERMPISS-ADRSHIHHRLMALGFTEKQTVLLIYCMALLFSMTGFVFSFSTT----WGAMLLLLLLIFSIEIIVEFIGLIGE----------DYRPILNLLQKIHRKRK-------------------------------- |
| 3MK7 Chain:A ((5-470)) | TSTAYSYKVVRQFAIMTVVWGIVGMGLGVFIAAQLAWPFLNFDLPWTSFGRLRPLHTNAVIFAFGGCALFATSYYSVQRTCQTTLFAPKLAAFTFWGWQLVILLAAISLPLGFTSSKEYAELEWPIDILITIVWVAYAVVFFGTLAKRKVKHIYVGNWFFGAFILTVAILHVVNNLEIPVTAMKSYSLYAGATDAMVQWWYGHNAVGFFLTAGFLGIMYYFVPKQAERPVYSYRLSIVHFWALITVYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHKLRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMVSIGALYHLVPKVFGREQMHSIGLINTHFWLATIGTVLYIASMWVNGIAQGLMWRAINDDGTLTYSFVESLEASHPGFVVRMIGGAIFFAGMLVMAYNTWRTVQAAKPAEYDAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -344161 for 2787 contacts (-123.5/contact) +
2D Compatibility (PS) -34999 + (NN) -3201 + (LL) 0
1D Compatibility (HY) -13600 + (ID) 3100
Total energy: -399061.0 ( -143.19 by residue)
QMean score : 0.227
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