Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDD---N---GDG---------------LA-FNKL-PSNTPQLDYF------------ID------KKTKIST-DLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSE-SIEKTHWFLEKSSPEKKEIKLISK |
3BF7 Chain:A ((14-254)) | -------------------------------------HNNSPIVLVHGLFGSLDNLGVLARDLVN--DHN--IIQVDVRNHGLSPR---------EP---------VMNYPAMAQDLVDTLDALQ----IDKATFIGHSMGGKAVMALTALAPD-----RIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPG------GNSPYVSEQYRDDLLAQFPQ-A---RAHVI--AGAGHWVHAEKPDAVLRAIRRYLND------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62573 for 1607 contacts (-38.9/contact) +
2D Compatibility (PS) -20839 + (NN) -9732 + (LL) 5348
1D Compatibility (HY) -6000 + (ID) 2150
Total energy: -95946.0 ( -59.71 by residue)
QMean score : 0.416
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