Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGT----------VDPKSKLTIDGKAVKKDDSGRFTYTYSLTNDNVAEVDVKLLAVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAK |
2XYA Chain:A ((21-99)) | -------------------------------------------------TTENGKFTGLGVYDRFVVVPTHADPGKEIQVDGITTKVIDS------YDLYNKNGIKLEITVLKLDRNEKFRDIRRYIPNNEDDY--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5927 for 324 contacts (18.3/contact) +
2D Compatibility (PS) -7164 + (NN) -1391 + (LL) 16144
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: 9916.0 ( 30.60 by residue)
QMean score : 0.366
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