Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEVEGVVQETLPNAMFNVELE---NGHKVLATVSGKIRMHYIRILPGDKVTVELSPYDLTRGRITYRFK
1T9H Chain:A ((12-82))
---------EGKIIKALSGFYY-VLDESEDSDKVIQCRGRGIFRKNKITPLVGDYVVYQAEN-------------
General information:
TITO was launched using:
RESULT:
Template:
1T9H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24395 for 263 contacts (-92.8/contact) +
2D Compatibility (PS) -5423 + (NN) -107 + (LL) 1972
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -29753.0 ( -113.13 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_1T9H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T9H-query.scw
PDB file :
Tito_Scwrl_1T9H.pdb
: