Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVRGMDVVI------VTTAKSDEESHELLTQLGMPFQK
3OW2 Chain:D ((4-145))
-------------------------MREPRIEKVVVHMGIGH--------ANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQ----TALPLAE----LATSQFDDTGNFSF--------------------GLDVTVNLVRPGYRVAKRDKASRSIPTK-------
General information:
TITO was launched using:
RESULT:
Template:
3OW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29794 for 619 contacts (-48.1/contact) +
2D Compatibility (PS) -12145 + (NN) -3562 + (LL) 5296
1D Compatibility (HY) -6400 + (ID) 2450
Total energy: -49055.0 ( -79.25 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_3OW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OW2-query.scw
PDB file :
Tito_Scwrl_3OW2.pdb
: