Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRHVVIFCASILNRFFASVECVKRRLNPL----EAYLVVMSNAERAGGLVLAATPKMKQEHHIKTGSRMYELPTWDKRIIIAPPRMKLYLKVNAMIQAIFRRYVPAEFIHVYSIDECFLDVTGSHLLFGSTEEIVRKIQRDILEELRLYVTVGIGDNPLLAKLALDNVAKNRDDGIAEWRYEHVPETIWKIRHLD--DVCGIGRRTAVRLQKMGIFNMYQLSQTPPQVLKNVMGVVGEQLYYHAHGIDYSLLNEKY-VPVSKSYGKSQILEKDYHVPAEVEIVIREMVEEVAMRLRQN-----HVDTAVIHLSVGYSKYSIKKGFSHQAKIPPTSSSHALIPYFLQLFRRYDEREPVRSIAISCGKITLKTGLQLNLFEDFTQTLNHEQLEITVDKIRSRYGFKSLMHASSLLNGATGLKRSEMVGGHKG |
| 2ASL Chain:A ((10-349)) | ---IVLFVD--FDYFYAQVEEV---LNPSLKGKPVVVCVFSGRFEDSGAVATANYEARK-FGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREY--SEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPN---GIKVIDDEEVKRL---IRELDIADVPGIGNITAEKLKKLGI---NKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKE-----TAYSESV--KLLQKILEEDERK-IRRIGVRFSKFI-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ASL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266429 for 2498 contacts (-106.7/contact) +
2D Compatibility (PS) -34596 + (NN) -6744 + (LL) 5416
1D Compatibility (HY) -17600 + (ID) 4850
Total energy: -324803.0 ( -130.03 by residue)
QMean score : 0.416
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