Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIML--VCSAGMSTSLLV-TKMEKAAEAQGIEAKIFAVAEAEAAN-----HLDEIDVLLLGPQVRF-LEGNMKKKLEPKGIPLAVINSVDYGMMKGDKVLEQALELMK
2M1Z Chain:A ((2-104))
KRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERF------DGKVVLEVPVSA-PIKDAEKVINAALALID
General information:
TITO was launched using:
RESULT:
Template:
2M1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70155 for 722 contacts (-97.2/contact) +
2D Compatibility (PS) -10415 + (NN) -3084 + (LL) 424
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -87580.0 ( -121.30 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_2M1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M1Z-query.scw
PDB file :
Tito_Scwrl_2M1Z.pdb
: