Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYDHLLNLTHYKDINPNLDLAIDYLLSHDLRNLDIGTYHISPEVILMVQSNQLSESFDHIFEYHKKYLDIHYVI-EGHEVIKL------------GKGDKVEVEEYLGDIGFIKCSEETSFDLRDNYIAFFFPEEAHQPNGMGSLGNYVKKGVLKVLMA |
2WM3 Chain:A ((103-176)) | ------------------------------------------------------------------RRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKG---EVEEYFRDIGVPMTSVRLPCYF-ENLLSHFLPQKA--PDGKSYLLSLPTGDVPMDGMS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4717 for 279 contacts (16.9/contact) +
2D Compatibility (PS) -6177 + (NN) -950 + (LL) 5100
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -3060.0 ( -10.97 by residue)
QMean score : 0.077
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