Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKVCYFTGRKTVSGNNRSHAMN---QTKRTVKPNLQKVTVLID--GKPKKVWVSARALKSGKVERV
3J7Y Chain:X ((74-139))
ESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEAYG
General information:
TITO was launched using:
RESULT:
Template:
3J7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3626 for 214 contacts (16.9/contact) +
2D Compatibility (PS) -5920 + (NN) 2324 + (LL) 0
1D Compatibility (HY) 3600 + (ID) 200
Total energy: 3430.0 ( 16.03 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Y-query.scw
PDB file :
Tito_Scwrl_3J7Y.pdb
: