Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKILPFTHNKQIKVGPLDNLGRATYSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFS---GM-NN---VPENLVTMT-KYLNTGFSENNPDGMLYYENRLDSWLANHKNFWLDYKVTPIYEGNNLVPSRVELQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTSPLAKIDYKTGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWYSLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ |
| 3ISM Chain:A ((95-164)) | ----------------------------------------------------------------------------------------------------------------SGYDRGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNR-------DAWNTLEAHVRRLTKT--YSNVYVCTGPLYLPHKEDDGKSYVKYEVIGANTVAVPTHFYKVIVGESADHKLHMESYVMPNQVISNDTPISVFQVPPESVERSAGLLFFDQINRKQLTTINGKKVA------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ISM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11562 for 303 contacts (-38.2/contact) +
2D Compatibility (PS) -6405 + (NN) 725 + (LL) 10912
1D Compatibility (HY) 800 + (ID) 500
Total energy: -6030.0 ( -19.90 by residue)
QMean score : 0.012
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