Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIATINKNDLIALGFSEGTSKRIIRQGKELLIARGFRVYQNKRIGTIPASIATELLGFDVQNSSLSRG
1WGN Chain:A ((24-54))
-------ETVVNMGYSYECVLRAMKKKGE-NIEQILDYLFAHSGPSSG--------------------
General information:
TITO was launched using:
RESULT:
Template:
1WGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10761 for 183 contacts (-58.8/contact) +
2D Compatibility (PS) -3103 + (NN) 1662 + (LL) 2180
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -13072.0 ( -71.43 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_1WGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WGN-query.scw
PDB file :
Tito_Scwrl_1WGN.pdb
: