Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYDTLIIGSGPGGMTAALYAARSNLKV----GLIEQG-APGGQMNNTAEIENYPGYDH-ISGPELSMKMYEPLEKFEVEHIYGIVQRVENDGDVKRVITED-ESYEAKTVILATGAKNSLLGVPGEEEYTSRGVSYCAVCDGA--FFRDQDLLVVGGGDSAVEEAVFLTQFAKSVTIIHRRDQLRAQKVLQDRAFANEKIKFVWDSVVKEIKGNEIKVSGVTVENLKTGEISEMTFGGVFIYVGLKPHSSMVSELGITDETGWVLTDTNMKTSIPGLYAIGDVRQKDLRQIATAVGEGAIAGQGVYNYITEHF |
| 4UP3 Chain:A ((4-314)) | IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSASAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTE-GPKTSVDGVFACGDVQDRVYRQAIVAAGSGCMAALSCEKWLQTH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155760 for 2589 contacts (-60.2/contact) +
2D Compatibility (PS) -32295 + (NN) -5226 + (LL) 184
1D Compatibility (HY) -22000 + (ID) 6000
Total energy: -221097.0 ( -85.40 by residue)
QMean score : 0.461
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