Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKDIIKVDHIFKSIGQKTILEDISFSIASNQCVALIGPNGAGKTTLMSTLLGDISISSGSLTI--FNL-PAHHNR----LKYKVAILPQ--ENVLPSKFTVRELIDFQRCLFPEVLPMSL---------ILDYLQWSDTHLQQFTETLSGGQKRLLAFVLTLVGKPQLLFLDEPTSGMDTSTRQRFWELIATLKKE-GVTIVYSSHYIEEVEHTADRILVLHKGKLLRDTTP---FAMKQEKTEKLFTVPLSYQKLLPTYLITECEAKSDSITFVTGEAEAVWKILADNGCPIEAIEMTNRTLLNRIFETTKEVKHENL |
| 4HZU Chain:B ((21-252)) | ------------------TALTDVSLTVPDRGYLAIIGHTGSGKSTLIQQLNALLKPTSGTIKIDEFTITPETTNAALKPLRQHVGMVFQFPENQLFEE-TVRQDIAFG----PKNFGMADADALALADEMLTTVGLDQSYAERSPFELSGGQMRRVAIAGVLAMQPKVLVLDEPTAGLDPQGRQEMMRLFARLHQEQGLTIVLVTHQMEDVAQYAEQVAVMHEGRLMKFGTPADVFSNREWLQDHQLDVPQAAQFARRLRDRGLTFPKQPLTADQLADYLAQQWAQR-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140888 for 1605 contacts (-87.8/contact) +
2D Compatibility (PS) -22750 + (NN) -9865 + (LL) 5096
1D Compatibility (HY) -14800 + (ID) 3700
Total energy: -186907.0 ( -116.45 by residue)
QMean score : 0.460
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