Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVFEKVQEIIVEELGKDAEEVTLNTTF-DDLDADSLDVFQVISEIEDAFDIQIETEEG--LNTVGDLVAYVEEKVK
3NY7 Chain:B ((6-73))
----ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA
General information:
TITO was launched using:
RESULT:
Template:
3NY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39921 for 420 contacts (-95.0/contact) +
2D Compatibility (PS) -6621 + (NN) -366 + (LL) 676
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -53282.0 ( -126.86 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_3NY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NY7-query.scw
PDB file :
Tito_Scwrl_3NY7.pdb
: