Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKRIKPNKKRELLKAKGINWKDVRLSQTLQEVASPKKKAPEAPKAVDLLEGLTANKQDVLKEAGLVSLEAFAKVSEADVLALKGIGPAAIKQLVDNGVVFAK
1Z00 Chain:B ((840-886))
---------------------------------------------FLLKMPGVNAKNCRSLMHH-VKNIAELAALSQDELTSILG-NAANAKQL---------
General information:
TITO was launched using:
RESULT:
Template:
1Z00.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20968 for 325 contacts (-64.5/contact) +
2D Compatibility (PS) -5091 + (NN) -2520 + (LL) 3784
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -27695.0 ( -85.22 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_1Z00.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z00-query.scw
PDB file :
Tito_Scwrl_1Z00.pdb
: