Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLN-AGGQRGLLAG----NIG----FPASEVVQAADDKDILVMELSSFQLMGVKE------FRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQ-------MSSSDFLVLN-FNQGISKELAKTTKATIVPFSTTE-------KVDGAYVQDKQLFYKGENIMLVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFDNTKVILIAGGLDRGNEFDELIPDITGLKHMVVLGESASRVKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFIDTFESLRGE |
| 3EAG Chain:A ((104-325)) | -----------------------------------------------------------------------------------------------------------VLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADI---FADLGA----IQTQFHYLVRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSF--DVLLDGKTAGRVKWD---LMGRHNRMNALAVIAAARHVGVDIQTACEALGAFKNVKR------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79505 for 1493 contacts (-53.3/contact) +
2D Compatibility (PS) -20516 + (NN) -4906 + (LL) 16624
1D Compatibility (HY) -10400 + (ID) 3300
Total energy: -102003.0 ( -68.32 by residue)
QMean score : 0.366
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