Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRIYPERLLESAKTIISIGVAYPHKLPQQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDKPVDYDCGDC--RRCLDACPTSCLIGD---GSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDICQICCPYNKGINNPLATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILEFMSNLTLKDEDSRKELELIRHKWQF |
| 1H98 Chain:A ((6-54)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPCIGVKDQSCVEVCPVECIYDGGDQFYIHPEECI-----------------------DCGACVPACPVNAIYPEEDVPEQWKSYIEKNRKLAGL----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16834 for 247 contacts (-68.2/contact) +
2D Compatibility (PS) -4675 + (NN) -3499 + (LL) 21048
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -8910.0 ( -36.07 by residue)
QMean score : 0.466
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