Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKLISIVDVKDYVGQEVTIGAWVANKSGKG-KIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIK---RLNQETSVYVTGIVKE-DERSKFG----YELDITDLEVIGESHE-YPITPKEH---------------GTDFLMDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFLSH-EESLDLQEAYVKALIQGVLDRAPQALDILERDVEALKRYIAEPFK--------RVSYDDAITLLQEHEADEDTDYEHLEHGDDFGSPHETW----ISNYFGVPTFVVN-YPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDDYDALVAKMDELGMDKSEYDF--YLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRMLHRIKP |
| 1ASZ Chain:A ((28-490)) | ---KFVDLDEAKD-SDKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLV-------KANKEGTISK-NMVKWAGSLNLESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEAEAEAAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEGGSSVFEVTYFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHEIELVR------KQYPVEEFKLPKDGKMVRLTYKEGIEMLRA-AGKEIGDFE------DLSTENEKFLGKLVRDKYDTDFYILDKFPLEIRPFYTMPDPANPKYSNSYDFFM--RGEEILSGAQRIHDHALLQERMKAHGLSPEDPGLKDYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKRLRP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ASZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158095 for 3194 contacts (-49.5/contact) +
2D Compatibility (PS) -44837 + (NN) -12961 + (LL) 1652
1D Compatibility (HY) -26800 + (ID) 6900
Total energy: -247941.0 ( -77.63 by residue)
QMean score : 0.454
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