Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALAKIVYASMTGNTEEIADIVADKLRDLGLDVEVEECTMVDAAD-FEDADIAIVATYTYGDG--DLPDEIVDFYEDLAEVDLSGKVYGVVGSGDTFYDYFCKSVDEFEAQFALTGAQKGADCVKVDLAAEDEDIENLEAFAEEIASKLN
1I1O Chain:A ((1-126))
-AKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSHEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAI--
General information:
TITO was launched using:
RESULT:
Template:
1I1O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67256 for 968 contacts (-69.5/contact) +
2D Compatibility (PS) -13206 + (NN) -4405 + (LL) 528
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -92089.0 ( -95.13 by residue)
QMean score : 0.666
(partial model without unconserved sides chains):
PDB file :
Tito_1I1O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I1O-query.scw
PDB file :
Tito_Scwrl_1I1O.pdb
: