Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDVVEKQTAKSFIMNVLNGLALGTVIVLIPG---------AILGELMKALLPMWSGFATLIAATAVATSMMGL---------VIGIMVGLNFKFN---PIQSASLGLAVMFAGGAATFLKGAIMLKGT-GDIINMGITAALGVLLIQ--------------FLSDKTKSF------------------TLIVIPTVTLLLVGGVGHVLLPYVKMITTMIGQGIASLLGLQP------VLMSILIAMIFCF---LIVSP--ITTVGIALAISLSGIGSGAANLGICAASFGLCMAGWSVNSKGTALAHVLGSPKISMANV--LAKPKIMLPMISSAAILGILGALFNI----------------QGTPASAGFGISGLIGPINALNLAKGGWSVMNMLLIIIIFVAAPIILNFIFNYLF-----IKVLKI--IDPMDYKLDI------------- |
| 2BMF Chain:A ((169-618)) | MASIEDNPEIEDDIFRKKR----LTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAPTRVVAAEMEEALRGLPIRYQTGREIVDLMCHATFTMRLLSPIRVPNYNLIIMD--EAHFTDPASIAARGYISTRVEMG--EAAGIFMTATPPGSRDPFPQSNAPIMDEEREIPERSWNSGHEWVTDFKGKTVWFVPS--IKAGNDIAACLRKNGKKVIQLSRKTFDSEYIKTRTNDWDFVVTTDISEMGANFKAERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRRGRVGRNPKNENDQYIY-MGEPLENDEDCAHWKEAKMLLDNINTPE--GIIPSMFEPEREKVDAIDGEYRLRGEARKTFVDLMRRGDLPVWLAYRVAAEGINYADRRWCFDGVKNNQILEENVEVEIWTKEGERKKLKPRWLDARIYSDPLALKEFKEFAAGRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -324869 for 2442 contacts (-133.0/contact) +
2D Compatibility (PS) -34342 + (NN) 7310 + (LL) 1368
1D Compatibility (HY) -7600 + (ID) 3050
Total energy: -361183.0 ( -147.90 by residue)
QMean score : 0.105
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