Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLSLHEVAKVVGAKNQVSEFEDVPLGNIEFDSRNISEGDLFLPLKGARDGHEFIEMAFDNGAIATISEKEIEGHPYLLVSDALKAFQVLAQYYIEKMNVDVIAVTGSNGKTTTKDMIAAILSTTYKTYKTQGNYNNEIGLPYTVLHMPEDTEKIILEMGQDHLGDIHVLSEIAKPRIAVVTLIGEAHLEF--FGSREKIAEGKMQITDGMSSDGILIAPGDPIIDPYLPANQMTIRFGHDQELQVTELKEEKHSLTFKTNALEHQLRIPVPGKYNATNAMVAAYVGKLLAVAEEDIVDALENLQLTRNRTEWKKSANGADILSDVYNANPTAMRLILETFSAIPNNDGGKKIALLADMKELGEQSVDLHNQMIMSIRPDSIDTLICYGQDIEGLAQLASQMFPIGKVYFFKKNQEVDQFDQLLAKVKDTLKEKDQILLKGSNSMNLSKIVDILEVG |
1EEH Chain:A ((96-379)) | -------------------------------------------------------------------------------------------ELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGN----IGLPALML-LDDECELYVLELSSFQLETTSSLQAVA----ATILNVTEDHMDRYPFGLQQYRA-AKLRIYE--NAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHL------TWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHV----DGTLHLLLGGDGK-----SADF-SPLARYLNGDNV-RLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1EEH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148852 for 2199 contacts (-67.7/contact) +
2D Compatibility (PS) -28769 + (NN) -8698 + (LL) 7816
1D Compatibility (HY) -11200 + (ID) 3300
Total energy: -193003.0 ( -87.77 by residue)
QMean score : 0.322
|
|
|