Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTRSKLAAGFLTLMSVATLAACSGKTSNGTNVVTMKGDTITVSDFYDQVKTS-KAAQQSMLTLILSRVFDTQ---YGDKVSDKKVSEAYNKTAKGYG---NSFSSALSQAGLTPEGYKQQIRTTMLVEYAVKEAA---KKELTEANYKEAYKNYTP------ETSVQVIKLDAEDKAKSVLKDVKADGADFAKIAKEKTTATDKKVEYKFDSAGTSLPKEVMSAAFKLDKNGVSDVVSTVDSTTYKTSYYIIKVTDKTEK-KSDWKSYKNRLKEVILKDKTSDRSFQNKVISKALEKANVKIKDKAFAGILSQYATTSGSSSLKK |
| 3RGC Chain:A ((21-271)) | -----------------------------NAIAVVVDKEPITTYDIDQTMKALKIDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKS---SYEQFRTNFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNKDKFTFYTQINANIYLSNNPQTLENIKNTK-------KTILKP------QNA--SLNT--SNADPRLLGLLSQIPVGSFSPVLNGKN------GYELYEVKSKDGTQTPEYEQVKNEVLNAYVSEQRQN--FIQDYFDKLRSKINIEYLR--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16624 for 1466 contacts (-11.3/contact) +
2D Compatibility (PS) -24781 + (NN) -5255 + (LL) 4448
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -53112.0 ( -36.23 by residue)
QMean score : 0.564
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