Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITKFPDQWQDKLTQRQFDDLTDIQNKLFQAITDGDNILGISPTGTGKTLAYLFPTLLKLQPK-KSQQLLILAPNSELAGQIFDVTKEWAEPLGLTAQLFLSGSSQKRQIERLK-KGPEILIGTAGRVFELVKLKKIKMMNINTIVLDEFDELLGDSQYHFVDNIINRVPRDQQMIYISATNKLD----NSKLADNTITIDLSDQKL--DTIKHYYITVDKRERT--DLLRKFSNIPDFRGLVFFNSLSDLGACEERLQFNRASAVSLASDINIKFRKVILEKFKNHDISLLLGTDLVARGIDIDNLEYVINFDIARDKETYTHRSGRTGRMGKEGCVITFVTHKEELKQLKKYATVAELVLHNQKLHLK |
| 3EIQ Chain:A ((52-381)) | -----------------FEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAM---MDQKERDVIMREFRSG---VLITTDLLA--IDVQQVSLVINYDLPTNRENYIHRIGRG-------VAINMVTEEDKRTLRDIETFYNTSIEEMPL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178308 for 2349 contacts (-75.9/contact) +
2D Compatibility (PS) -33027 + (NN) -16560 + (LL) 1960
1D Compatibility (HY) -26000 + (ID) 4250
Total energy: -256185.0 ( -109.06 by residue)
QMean score : 0.537
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