Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIHIEAKQGEIADKILLPGDPLRAKFIAENFLEDAVCFNTVRNMFGYTGTYKGHRVSVMGTGMGMPSISIYARELIVDYGVKTLIRVGTAGAINPDIHVRELVLAQAAATNSNIIRNDWPEFDFPQIADFKLLDKAYHIAKEMDITTHVGSVLSSDVFYSNQPDRNMALGKLGVHAIEMEAAALYYLAAQHNVNALAMMTISDNLNNPEEDTSAEERQTTFTDMMKVGLETLISE
4DAN Chain:A ((22-250))
-SVHIGAEKGQIADTVLLPGDPLRAKFIAETYLENVECYNEVRGMYGFTGTYKGKKISVQGTGMGVPSISIYVNELIQSYDVQNLIRVGSCGAIRKDVKVRDVILAMTSSTDSQMNRVAFGSVDFAPCADFELLKNAYDAAKDKGVPVTVGSVFTADQFY-NDDSQIEKLAKYGVLGVEMETTALYTLAAKHGRKALSILTVSDHVLTGEE-TTAEERQTTFHDMIDVALHS----
General information:
TITO was launched using:
RESULT:
Template:
4DAN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149889 for 1990 contacts (-75.3/contact) +
2D Compatibility (PS) -24817 + (NN) -11176 + (LL) 560
1D Compatibility (HY) -24400 + (ID) 6150
Total energy: -215872.0 ( -108.48 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4DAN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DAN-query.scw
PDB file :
Tito_Scwrl_4DAN.pdb
: