Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDELKKLAGVTAA-KYVKNGMIVGLGTGSTAYFFVEEIGRRVKEEGLQ-VVGVTTSNRTTEQARGLGIPLKSADDI-DVIDVTVDGADEVDPDFNG-IKGGGGALLMEKIVATPTKEYIWVVDESKLVE----TLGAFKLPVEVVRYGSERLFRVF------KSKGYCPSFRETEG---------DRFITDMGNYIIDLDL-KKIEDPKQLANELDHTVGVVEHGLFNSMVNKVIVAGKNGLDILEK |
| 4NML Chain:A ((4-249)) | QDKAKQAVGYFAVDTYVRSGMKVGLGTGTTAKFVVERIGQRMQEGSLKDLLCVPTSEATRKQAESLGIPLTTLDGIADCLDVAIDGADEILPPTLGLVKGRGGALLREKMIAAAAKTFIVAADETKLVSNGIGSTGA--LPVEVVVFSGSHTKRLLSALPSVKRHGGRAEFRKRAGAAQEDIREEDRFVTDNGNYIVDLYFTETVPDLHEMDKELKSIPGVVETGFFLDLASVCLIGKADGSVATLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95464 for 1807 contacts (-52.8/contact) +
2D Compatibility (PS) -23565 + (NN) -7454 + (LL) 196
1D Compatibility (HY) -17200 + (ID) 4950
Total energy: -148437.0 ( -82.15 by residue)
QMean score : 0.582
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