Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSFFQKTFNLNLNLLFFGFIAFLISYGFHVLGNQIKTSSFLSSQSVFADIQTKLQVVDQYTQSIAYLFILIAIILTLTELCQRIMKDSIWNYFKSVYQTL
2LQ2 Chain:A ((1-30))
--------------------------------VKGRIDAPDFPSSPAILGKAATDVVAAWKS----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LQ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3258 for 120 contacts (27.1/contact) +
2D Compatibility (PS) -2951 + (NN) 1361 + (LL) 7368
1D Compatibility (HY) -400 + (ID) 250
Total energy: 8386.0 ( 69.88 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_2LQ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LQ2-query.scw
PDB file :
Tito_Scwrl_2LQ2.pdb
: