Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNREEVQLLGFEIVAYAGDARSKLLEALRAAEAGDFSKADALVEEASGCIAEAHKSQTTMLAKEAAGEEIPYSVTMMHGQDHLMTTILLKDVMHHLIELYKRGIK
1WCR Chain:A ((1-103))
--AEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQLHLMTSMLARELITELIELHEKLKA
General information:
TITO was launched using:
RESULT:
Template:
1WCR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20070 for 707 contacts (-28.4/contact) +
2D Compatibility (PS) -11421 + (NN) -9852 + (LL) 128
1D Compatibility (HY) -8000 + (ID) 1600
Total energy: -50815.0 ( -71.87 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1WCR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WCR-query.scw
PDB file :
Tito_Scwrl_1WCR.pdb
: