Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYIWSYLKRYPNWLWLDLLGAMLFVTVILGMPTALAGMIDNGVTKGDRTGVYLWTFIMFIFVVLGIIGRITM-AYASSRLTTTMIRDMRNDMYAKLQEYSHHEYEQIGVSSLVTRMTSDTFVLMQFAEMSLRLGLVTPMVMIFSVVMILITSPSLAWLVAVAMPLLVGVVLYVAIKTKPLSERQQTMLDKINQYVRENLTGLRVVRAFARENFQSQKF--------QVANQRYTDTSTGLFKLTGLTEPLFVQIIIAMIVAIVWFALDPLQRGAIKIGDLV-AFIEYSFHALFSFLLFANLFTMYPRMVVSSHRIREVMDMPISI------NPNAEGVTDT-KLKGHLEFDNVTFAYPGETESPVLHDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTL---GKILVDGVDVRDYNLKSLRQKIGFIPQKALLFTGTIGENLKYGKADATIDDLRQAVDISQAKEFIESHQEAFETHLAEGGSNLSGGQKQRLSIARAVVKDPDLYIFDDSFSALDYKTDATLRARLKEVTGDS--TVLIVAQRVGTIMDADQIIVLDEGEIVGRGTHAQLIE--NNAIYREIAESQLKNQNLSEGE |
| 3WMF Chain:A ((80-597)) | ----------------------------------------------------------VFEFIVAG--SRTALFGIASERLA----RDLRVAAFSNLVEQDVTYFDRRKAGELGGKLNNDVQVI-QYSFSKLGAVLFNLAQCVVGIIVAFIFAPALTGVLIALSPLVVLAVVVQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRTTKAFEAERYETQRYGSKLDPLYRLGRRRYI--SDGLF--FGLS----MLVIFCVYALALWWGGQLIARGSLNLGNLLTAF----FSAILGFMGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -262134 for 3514 contacts (-74.6/contact) +
2D Compatibility (PS) -52339 + (NN) -14104 + (LL) 6828
1D Compatibility (HY) -42400 + (ID) 7800
Total energy: -371949.0 ( -105.85 by residue)
QMean score : 0.383
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