Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVIKVKTISETLDYISKHTASVARFGDGEIDIIAGNSIPYQVYDSELAKRLERLLNRQSNEKLVICVSDVFDNLGRYNDFSQQFWRDHLYQYNDLYQKNCQAEWYGSTFISRPYMDLLDKSLSVTYFEQLKALWKNKDILIVEGETSRSGVGNDLFNDANTISRIICPSKDAFSSFYEIKETILEHSRGKLILLMLGPTAKLLAEDLSQLGHQAIDLGHIDSEYEWFKMGAVSKVKLSHKHTAEHNFDEDITLIEDNSYENQIVSKIGTSDRQYALTVTLTDDIWELEHLLQRCPNTNFHIAAPVYCS-DRLKQLVG----Y--------PNYYLHEAITEEQFEVLLLNSDIYLDI-NHGEEVWNVVDRCITEGKTIYGIRRARKDNQYISF--E--RTM--DDFEYLCDTIKQNR |
2XCI Chain:A ((217-341)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVD--RFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31202 for 660 contacts (-47.3/contact) +
2D Compatibility (PS) -11217 + (NN) -2032 + (LL) 20352
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -26099.0 ( -39.54 by residue)
QMean score : 0.445
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